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Fig. 3 | One Health Outlook

Fig. 3

From: Developing a one health data integration framework focused on real-time pathogen surveillance and applied genomic epidemiology

Fig. 3

Model one health database and scenarios for genomic data storage

(A) Model One Health Integrated Database, (B) Elaboration of scenarios for genomic data storage and analysis. Scenario 1: sequence data is stored within the integrated One Health database, which contains standardized assembly pipelines and quality checks as well as analysis pipelines and visualization tools. Scenario 2: sequence data is stored external to the integrated One Health database and linked through public sequence repository identifiers. To conduct analyses, sequence data is extracted from a public repository, combined with extracted data from the integrated One Health database, and analyzed using standardized pipelines. Analysis and visualization occurs external to the integrated One Health database

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One Health Outlook

ISSN: 2524-4655